SEL1L

Identifiers

SEL1L, PRO1063, SEL1-LIKE, SEL1L1, SEL1L ERAD E3 ligase adaptor subunit

External IDs

MGI: 1329016 HomoloGene: 31286 GeneCards: SEL1L

Gene ontology
Molecular function	• protein binding
Cellular component	• integral component of membrane • Hrd1p ubiquitin ligase complex • endoplasmic reticulum membrane • Derlin-1 retrotranslocation complex • membrane • endoplasmic reticulum • endoplasmic reticulum quality control compartment • Hrd1p ubiquitin ligase ERAD-L complex
Biological process	• Notch signaling pathway • protein stabilization • retrograde protein transport, ER to cytosol • ER-associated ubiquitin-dependent protein catabolic process • response to endoplasmic reticulum stress • protein secretion • endoplasmic reticulum mannose trimming • triglyceride metabolic process • ERAD pathway
Sources:Amigo / QuickGO

RNA expression pattern

More reference expression data

Orthologs

Species

Human

Mouse

Entrez


6400


20338

Ensembl


ENSG00000071537


ENSMUSG00000020964

UniProt


Q9UBV2


Q9Z2G6

RefSeq (mRNA)


NM_001244984 NM_005065


NM_001039089 NM_011344

RefSeq (protein)


NP_001231913.1 NP_005056.3


NP_001034178.1 NP_035474.1

Location (UCSC)

Chr 14: 81.47 – 81.53 Mb

Chr 12: 91.81 – 91.85 Mb

PubMed search

^[1]

^[2]

Wikidata

View/Edit Human

View/Edit Mouse

Protein sel-1 homolog 1 is a protein that in humans is encoded by the SEL1L gene.^[3]^[4]^[5]^[6]

Clinical relevance

A mutation in this gene in Finnish Hound dogs have been implicated in cases of cerebellar ataxia.^[7] Mutant cells suffer disruptions in their endoplasmic reticula, leading to disease.

References

↑ "Human PubMed Reference:".
↑ "Mouse PubMed Reference:".
↑ Biunno I, Appierto V, Cattaneo M, Leone BE, Balzano G, Socci C, Saccone S, Letizia A, Della Valle G, Sgaramella V (Feb 1998). "Isolation of a pancreas-specific gene located on human chromosome 14q31: expression analysis in human pancreatic ductal carcinomas". Genomics. 46 (2): 284–6. doi:10.1006/geno.1997.5018. PMID 9417916.
↑ Donoviel DB, Bernstein A (Apr 1999). "SEL-1L maps to human chromosome 14, near the insulin-dependent diabetes mellitus locus 11". Genomics. 56 (2): 232–3. doi:10.1006/geno.1998.5534. PMID 10051412.
↑ Biunno I, Cattaneo M, Orlandi R, Canton C, Biagiotti L, Ferrero S, Barberis M, Pupa SM, Scarpa A, Ménard S (May 2006). "SEL1L a multifaceted protein playing a role in tumor progression". J Cell Physiol. 208 (1): 23–38. doi:10.1002/jcp.20574. PMID 16331677.
↑ "Entrez Gene: SEL1L sel-1 suppressor of lin-12-like (C. elegans)".
↑ Kyöstilä K, Cizinauskas S, Seppälä EH, Suhonen E, Jeserevics J, Sukura A, Syrjä P, Lohi H (2012). "A SEL1L Mutation Links a Canine Progressive Early-Onset Cerebellar Ataxia to the Endoplasmic Reticulum–Associated Protein Degradation (ERAD) Machinery". PLoS Genetics. 8 (6): e1002759. doi:10.1371/journal.pgen.1002759. PMC 3375262. PMID 22719266.

Donoviel DB, Donoviel MS, Fan E, Hadjantonakis A, Bernstein A (1999). "Cloning and characterization of Sel-1l, a murine homolog of the C. elegans sel-1 gene.". Mech. Dev. 78 (1–2): 203–7. doi:10.1016/S0925-4773(98)00146-4. PMID 9858735.
Harada Y, Ozaki K, Suzuki M, Fujiwara T, Takahashi E, Nakamura Y, Tanigami A (1999). "Complete cDNA sequence and genomic organization of a human pancreas-specific gene homologous to Caenorhabditis elegans sel-1". J. Hum. Genet. 44 (5): 330–6. doi:10.1007/s100380050171. PMID 10496078.
Biunno I, Bernard L, Dear P, Cattaneo M, Volorio S, Zannini L, Bankier A, Zollo M (2000). "SEL1L, the human homolog of C. elegans sel-1: refined physical mapping, gene structure and identification of polymorphic markers". Hum. Genet. 106 (2): 227–35. doi:10.1007/s004390051032. PMID 10746565.
Orlandi R, Cattaneo M, Troglio F, Casalini P, Ronchini C, Ménard S, Biunno I (2002). "SEL1L expression decreases breast tumor cell aggressiveness in vivo and in vitro". Cancer Res. 62 (2): 567–74. PMID 11809711.
Chiaramonte R, Sabbadini M, Balordi F, Comi P, Sherbet GV (2003). "Allele frequency of two intragenic microsatellite loci of SEL1L gene in Northern Italian population". Mol. Cell. Biochem. 232 (1–2): 159–61. doi:10.1023/A:1014828829621. PMID 12030374.
Chiaramonte R, Calzavara E, Basile A, Comi P, Sherbet GV (2003). "Notch signal transduction is not regulated by SEL1L in leukaemia and lymphoma cells in culture". Anticancer Res. 22 (6C): 4211–4. PMID 12553058.
Zhang H, Li XJ, Martin DB, Aebersold R (2003). "Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry". Nat. Biotechnol. 21 (6): 660–6. doi:10.1038/nbt827. PMID 12754519.
Clark HF, Gurney AL, Abaya E, Baker K, Baldwin D, Brush J, Chen J, Chow B, Chui C, Crowley C, Currell B, Deuel B, Dowd P, Eaton D, Foster J, Grimaldi C, Gu Q, Hass PE, Heldens S, Huang A, Kim HS, Klimowski L, Jin Y, Johnson S, Lee J, Lewis L, Liao D, Mark M, Robbie E, Sanchez C, Schoenfeld J, Seshagiri S, Simmons L, Singh J, Smith V, Stinson J, Vagts A, Vandlen R, Watanabe C, Wieand D, Woods K, Xie MH, Yansura D, Yi S, Yu G, Yuan J, Zhang M, Zhang Z, Goddard A, Wood WI, Godowski P, Gray A (2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC 403697. PMID 12975309.
Cattaneo M, Canton C, Albertini A, Biunno I (2004). "Identification of a region within SEL1L protein required for tumour growth inhibition". Gene. 326: 149–56. doi:10.1016/j.gene.2003.10.021. PMID 14729273.
Lilley BN, Ploegh HL (2006). "Multiprotein complexes that link dislocation, ubiquitination, and extraction of misfolded proteins from the endoplasmic reticulum membrane". Proc. Natl. Acad. Sci. U.S.A. 102 (40): 14296–301. doi:10.1073/pnas.0505014102. PMC 1242303. PMID 16186509.
Otsuki T, Ota T, Nishikawa T, Hayashi K, Suzuki Y, Yamamoto J, Wakamatsu A, Kimura K, Sakamoto K, Hatano N, Kawai Y, Ishii S, Saito K, Kojima S, Sugiyama T, Ono T, Okano K, Yoshikawa Y, Aotsuka S, Sasaki N, Hattori A, Okumura K, Nagai K, Sugano S, Isogai T (2007). "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries". DNA Res. 12 (2): 117–26. doi:10.1093/dnares/12.2.117. PMID 16303743.
Cattaneo M, Fontanella E, Canton C, Delia D, Biunno I (2006). "SEL1L affects human pancreatic cancer cell cycle and invasiveness through modulation of PTEN and genes related to cell-matrix interactions". Neoplasia. 7 (11): 1030–8. doi:10.1593/neo.05451. PMC 1502024. PMID 16331889.
Saltini G, Dominici R, Lovati C, Cattaneo M, Michelini S, Malferrari G, Caprera A, Milanesi L, Finazzi D, Bertora P, Scarpini E, Galimberti D, Venturelli E, Musicco M, Adorni F, Mariani C, Biunno I (2006). "A novel polymorphism in SEL1L confers susceptibility to Alzheimer's disease". Neurosci. Lett. 398 (1–2): 53–8. doi:10.1016/j.neulet.2005.12.038. PMID 16412574.

This article is issued from Wikipedia - version of the 12/3/2016. The text is available under the Creative Commons Attribution/Share Alike but additional terms may apply for the media files.

SEL1L

Clinical relevance

References

Further reading